Clone cgenie.muffin from Github onto your work dir.

git clone https://github.com/derpycode/cgenie.muffin.git

Then, a few files need to be changed in cgenie.muffin/genie-main:

File user.mak

GENIE_ROOT        = /work/crct/al1966po/cgenie.muffin
OUT_DIR           = /work/crct/al1966po/cgenie.output
...
# === NetCDF library ===
NETCDF_DIR=/user1/crct/al1966po/NetCDF_for_GENIE

Files runmuffin.sh and runmuffin_nocleanall.sh

HOMEDIR=/work/crct/al1966po

File user.sh

CODEDIR=/work/crct/al1966po/cgenie.muffin
OUTROOT=/work/crct/al1966po/cgenie_output
ARCHIVEDIR=/work/crct/al1966po/cgenie_archive
LOGDIR=/work/crct/al1966po/cgenie_log

File makefile.arc

(line 575)
NETCDF= $(LIB_SEARCH_FLAG)$(PATH_QUOTE)$(NETCDF_DIR)/lib$(PATH_QUOTE) $(LIB_FLAG)$(NETCDF_NAMEF) $(LIB_FLAG)$(NETCDF_NAME)

You will have to get the NetCDF library found here: /user1/crct/al1966po/NetCDF_for_GENIE.

GENIE runs with the following modules:

 1) gcc/9.1.0   2) python/2.7/intel/2018   3) intel/2018

Beyond this, all info needed can be found [here] in the official documentation.